SNPlexGENOMICS
Project experience

Explore sequencing, bioinformatics, genome editing, and plant tissue culture work presented by SNPlex Genomics.

4Scientific disciplines
34Published project examples
150Rice genotypes resequenced
328Grape genotypes propagated
Sequence generation

Sequencing Service Projects

Genome resequencing and organism-focused sequencing projects supporting crop and biological research.

01

Rice Genome Resequencing (150 genotypes)

Partner: Gazipur Agricultural University, Bangladesh
02

Wheat Genome Resequencing (50 genotypes)

03

Citrus Genome Resequencing

In-house
04

Ceratobasidium theobromae genome sequencing

In-house
05

Amrasca biguttula genome sequencing

Data to interpretation

Bioinformatics and Genotyping Projects

Assembly, variant analysis, population genomics, marker development, and genotyping workflows.

01

Rice genome assembly and variant calling

Partner: Gazipur Agricultural University, Bangladesh
02

Wheat genome assembly and variant calling

03

Genetic distance analysis (164 genotypes)

04

Identification of mutation hotspots

05

KASP genotyping of citrus

06

Trait-specific SNP panel development

07

Variant annotation

08

Species-specific SNP panel development

09

Nucleotide diversity analysis

10

PCA analysis

11

Admixture analysis

12

Phylogenetic tree analysis

Precise modification

Genome Editing Projects

Design, construct, and validate targeted genome-editing systems.

01

gRNA design

02

Multiplex CRISPR vector

03

Indel check

04

Custom cloning

05

CRISPR vector

Regeneration and propagation

Plant Tissue Culture Projects

Transformation, embryogenesis, transgenic recovery, and clonal propagation across crop species.

01

Agrobacterium-mediated citrus transformation

02

Agrobacterium-mediated grape transformation

03

Citrus somatic embryogenesis

04

Citrus suspension cell culture

05

Citrus transgenic plant recovery

06

Grape somatic embryogenesis

07

Grape transgenic recovery

08

Grape clonal propagation (328 genotypes)

09

Fig (Ficus carica) clonal propagation

10

Banana clonal propagation

11

Potato clonal propagation

12

Clone your favorite plant

Move your research forward

Complex biology. Clear next steps.

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